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6G8S

[Ru(TAP)2(11,12-CN2-dppz)]2+ bound to d(CCGGACCCGG/CCGGGTCCGG)2

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2017-07-23
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97950
Spacegroup nameP 43
Unit cell lengths47.247, 47.247, 33.981
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution23.623 - 1.660
R-factor0.1883
Rwork0.187
R-free0.20340
Structure solution methodSAD
RMSD bond length0.005
RMSD bond angle0.939
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwareSHELXCD
Refinement softwarePHENIX ((1.13_2998: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]27.5901.690
High resolution limit [Å]1.6601.660
Rmerge0.0510.905
Rmeas0.0530.942
Rpim0.0150.261
Number of reflections9018460
<I/σ(I)>23.92.4
Completeness [%]100.0100
Redundancy12.913
CC(1/2)0.9990.652
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7291Crystallisation was observed in a number of conditions from the Nucleic Acid Mini-Screen from Hampton Research, where the best diffracting example came from a 8uL drop containing; 125 uM d(CCGGACCCGG/CCGGGTCCGG)2, 750 uM rac-[Ru(TAP)2(11,12-CN2-dppz)]2+, 7.5% v/v MPD, 30 mM pH 7 sodium cacodylate, 9 mM spermine tetrahydrochloride, 60 mM KCl and 15 mM BaCl2; all equilibrated against 1 mL of 35% v/v MPD. Orange/red rods grew following roughly 3 weeks of incubation at 291 K.

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PDB entries from 2024-07-10

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