6G7Z
Lariat-capping ribozyme with a shortened DP2 stem loop
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-09-10 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 59.945, 88.791, 110.038 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.395 - 3.336 |
R-factor | 0.238474450676 |
Rwork | 0.235 |
R-free | 0.30422 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4p8z |
RMSD bond length | 0.003 |
RMSD bond angle | 0.729 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | SHELXS |
Refinement software | REFMAC (1.11rc1_2513) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.400 | 3.818 |
High resolution limit [Å] | 3.330 | 3.336 |
Number of reflections | 108094 | 2173 |
<I/σ(I)> | 8.37 | |
Completeness [%] | 94.1 | |
Redundancy | 6.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 200 mM NaCl 100 mM HEPES pH 7.5 5-25% w/v PEG 3350 |