6G45
Crystal structure of mavirus major capsid protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-08-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 134.050, 137.050, 138.330 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.680 - 2.500 |
R-factor | 0.2139 |
Rwork | 0.213 |
R-free | 0.23340 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6g44 |
RMSD bond length | 0.006 |
RMSD bond angle | 1.101 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.680 | 48.680 | 2.600 |
High resolution limit [Å] | 2.500 | 10.000 | 2.500 |
Rmerge | 0.130 | 0.067 | 0.772 |
Rmeas | 0.137 | 0.071 | 0.812 |
Number of reflections | 88504 | 1522 | 9704 |
<I/σ(I)> | 13.94 | 29.59 | 3.71 |
Completeness [%] | 100.0 | 98.8 | 100 |
Redundancy | 10.09 | 9.015 | 10.316 |
CC(1/2) | 0.996 | 0.993 | 0.889 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 1.3 - 1.6 M ammonium sulfate, 19-25% glycerol |