6FVN
DNA polymerase sliding clamp from Mycobacterium tuberculosis with bound P7 peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-02-26 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 79.447, 126.761, 171.020 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 101.837 - 3.142 |
R-factor | 0.2579 |
Rwork | 0.256 |
R-free | 0.29120 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4tr7 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.840 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | BUSTER |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 101.837 | 171.085 | 3.198 |
High resolution limit [Å] | 3.142 | 8.532 | 3.143 |
Rmerge | 0.378 | 0.047 | 3.178 |
Rmeas | 0.393 | 0.049 | 3.314 |
Rpim | 0.107 | 0.014 | 0.935 |
Number of reflections | 27157 | 1687 | 153 |
<I/σ(I)> | 9.7 | 42.1 | 1.2 |
Completeness [%] | 92.9 | 99.9 | 12.8 |
Redundancy | 13.3 | 12.2 | 12.4 |
CC(1/2) | 0.993 | 0.999 | 0.309 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 278 | Acetate de Na 3.2M pH 6.9 18% PEG 3350 (1microliter)+ Hampton Research PEG Ion kit A2 (1microliter): 0.2M potassium fluoride, 20% PEG 3350 pH 7.3 |