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6FPW

Structure of fully reduced Hydrogenase (Hyd-1)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2017-05-13
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9686
Spacegroup nameP 21 21 21
Unit cell lengths93.835, 97.729, 182.911
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution91.460 - 1.350
R-factor0.116
Rwork0.114
R-free0.14400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5lmm
RMSD bond length0.015
RMSD bond angle1.661
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0189)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]97.7001.370
High resolution limit [Å]1.3501.350
Rmerge0.1131.160
Number of reflections366570
<I/σ(I)>7.81.3
Completeness [%]100.0100
Redundancy76.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.7296100 mM bis-tris pH 5.7 200 mM LiSO4 150 mM NaCl 19-22% PEG 3350

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PDB entries from 2024-11-06

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