6FO5
FIRST DOMAIN OF HUMAN BROMODOMAIN BRD4 IN COMPLEX WITH INHIBITOR #17
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID29 |
| Synchrotron site | ESRF |
| Beamline | ID29 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-11-29 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.9 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 44.284, 47.498, 58.468 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 36.870 - 0.950 |
| R-factor | 0.13641 |
| Rwork | 0.136 |
| R-free | 0.15362 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2oss |
| RMSD bond length | 0.030 |
| RMSD bond angle | 2.363 |
| Data reduction software | XDS (0.53) |
| Data scaling software | XDS (0.53) |
| Phasing software | PHASER (2.7.17) |
| Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 36.870 | 0.980 |
| High resolution limit [Å] | 0.950 | 0.950 |
| Rmerge | 0.048 | 1.617 |
| Rmeas | 0.052 | 1.819 |
| Rpim | 0.019 | 0.806 |
| Number of reflections | 78067 | 7498 |
| <I/σ(I)> | 16.41 | 0.78 |
| Completeness [%] | 99.6 | 96.26 |
| Redundancy | 6.8 | 4.7 |
| CC(1/2) | 0.999 | 0.434 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | EVAPORATION | 8.5 | 292 | 2.5mM of #17 inhibitor (in DMSO) final concentration. Ratio 1:1 (protein:precipitant. 12mg/mL of BRD4(BD1) protein. Precipitant agent: 0.3M NaNO3; 0.1M NaCl; 22% (w/v) PEG3350; 10% (w/v) ethylene glycol. Cryoprotectant: 10 % (w/v) glycerol. |






