6FMB
Crystal structure of the BEC1054 RNase-like effector from the fungal pathogen Blumeria graminis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2015-01-01 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.92, 0.95 |
Spacegroup name | P 62 2 2 |
Unit cell lengths | 60.520, 60.520, 78.280 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 52.410 - 1.300 |
R-factor | 0.14536 |
Rwork | 0.144 |
R-free | 0.17645 |
Structure solution method | SAD |
RMSD bond length | 0.011 |
RMSD bond angle | 1.568 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | SHARP |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 52.510 | 1.340 |
High resolution limit [Å] | 1.300 | 1.300 |
Number of reflections | 21286 | 1483 |
<I/σ(I)> | 23.4 | 5 |
Completeness [%] | 99.5 | |
Redundancy | 6 | |
CC(1/2) | 0.998 | 0.996 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | Purified CSEP0064/BEC1054 was dialysed into crystallisation buffer (10 mM Tris, 150 mM NaCl, pH 7.0) and concentrated to 10 mg/ml for crystallisation. Commercially available solution conditions for crystallisation (Hampton Research,CA, USA) were screened. The protein was combined with the mother liquor on a 1:1 ratio in 200 nl drops. Crystals obtained in 0.1 M sodium acetate buffer pH 5.0, supplemented with 30% PEG 4000, 0.4 M (NH4)2SO4 were cryoprotected with 30% glycerol and flash frozen for data collection. |