6FJW
Streptococcus thermophilus Cas6
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-07-18 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.979700 |
Spacegroup name | P 31 1 2 |
Unit cell lengths | 91.469, 91.469, 72.419 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 79.214 - 2.700 |
R-factor | 0.2171 |
Rwork | 0.213 |
R-free | 0.25190 |
Structure solution method | SAD |
RMSD bond length | 0.014 |
RMSD bond angle | 0.537 |
Data reduction software | XDS |
Data scaling software | SCALA (3.2.19) |
Phasing software | SHELXDE |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 79.214 | 79.214 | 2.850 |
High resolution limit [Å] | 2.700 | 8.540 | 2.700 |
Rmerge | 0.082 | 0.034 | 0.879 |
Rmeas | 0.108 | 0.065 | 0.929 |
Rpim | 0.024 | 0.016 | 0.209 |
Total number of observations | 194927 | 6015 | 27661 |
Number of reflections | 9685 | 340 | 1421 |
<I/σ(I)> | 29.5 | 80.7 | 4.1 |
Completeness [%] | 99.9 | 100 | 99.9 |
Redundancy | 20.1 | 17.7 | 19.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291 | Crystallization buffer was 0.1 M Tris-HCl (pH 8.5), 0.2 M CaCl2, 2.8% ethanol, 2.8% ethylene glycol, 2.8% 2-propanol,2.8% n-butanol, 2.8% 2-Methyl-2,4-pentanediol |