6FJG
Structure of D80A-fructofuranosidase from Xanthophyllomyces dendrorhous complexed with fructose and 4-nitrophenol
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-05-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9793 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 74.505, 205.652, 146.512 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 119.330 - 1.730 |
R-factor | 0.16354 |
Rwork | 0.163 |
R-free | 0.17822 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5ann |
RMSD bond length | 0.007 |
RMSD bond angle | 1.443 |
Data reduction software | XDS (0.72) |
Data scaling software | Aimless (0.5.26) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 84.170 | |
High resolution limit [Å] | 1.730 | |
Rmerge | 0.062 | |
Rmeas | 0.067 | |
Rpim | 0.026 | |
Number of reflections | 234346 | 11421 |
<I/σ(I)> | 16.7 | 3.1 |
Completeness [%] | 100.0 | 100 |
Redundancy | 6.8 | |
CC(1/2) | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 1.2M Sodium Citrate tribasic dihydrate |