6F86
Crystal Structure of E. coli GyraseB 24kDa in complex with 4-(4-bromo-1H-pyrazol-1-yl)-6-[(ethylcarbamoyl)amino]-N-(pyridin-3-yl)pyridine-3-carboxamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-02-01 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9790 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 99.340, 99.340, 50.210 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.670 - 1.900 |
R-factor | 0.2041 |
Rwork | 0.203 |
R-free | 0.21870 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4uro |
RMSD bond length | 0.011 |
RMSD bond angle | 1.530 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.17) |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.670 | 49.670 | 1.950 |
High resolution limit [Å] | 1.900 | 8.500 | 1.900 |
Rmerge | 0.194 | 0.076 | 1.527 |
Rmeas | 0.205 | 0.081 | 1.613 |
Rpim | 0.065 | 0.027 | 0.514 |
Number of reflections | 22689 | 288 | 1657 |
<I/σ(I)> | 8 | ||
Completeness [%] | 99.7 | 99.7 | 99 |
Redundancy | 9.8 | 8 | 9.6 |
CC(1/2) | 0.996 | 0.996 | 0.506 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 25-30% PEG400 and 100 mM Hepes pH 6.5. |