6F4N
Human JMJD5 in complex with MN and 2OG.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I03 |
| Synchrotron site | Diamond |
| Beamline | I03 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-01-19 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 0.9795 |
| Spacegroup name | P 32 2 1 |
| Unit cell lengths | 68.002, 68.002, 267.898 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 49.160 - 2.541 |
| R-factor | 0.2009 |
| Rwork | 0.199 |
| R-free | 0.22990 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4gjz |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.877 |
| Data reduction software | HKL-2000 (706E) |
| Data scaling software | HKL-2000 (706E) |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 49.160 | 2.630 |
| High resolution limit [Å] | 2.540 | 2.540 |
| Rmerge | 0.081 | 1.100 |
| Rpim | 0.030 | 0.423 |
| Number of reflections | 24683 | 2411 |
| <I/σ(I)> | 25.1 | 1.8 |
| Completeness [%] | 99.9 | 99.7 |
| Redundancy | 9.4 | 8.7 |
| CC(1/2) | 0.999 | 0.738 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | 0.1 M Bis-Tris pH 6.0, 21.4 % PEG3350, 0.07 M MgCl2, 0.002 M MnCl2, 300 nl sitting drops (sample:well, 1:2 ratio) |






