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6F4N

Human JMJD5 in complex with MN and 2OG.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2016-01-19
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9795
Spacegroup nameP 32 2 1
Unit cell lengths68.002, 68.002, 267.898
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution49.160 - 2.541
R-factor0.2009
Rwork0.199
R-free0.22990
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4gjz
RMSD bond length0.005
RMSD bond angle0.877
Data reduction softwareHKL-2000 (706E)
Data scaling softwareHKL-2000 (706E)
Phasing softwarePHASER
Refinement softwarePHENIX ((1.12_2829: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.1602.630
High resolution limit [Å]2.5402.540
Rmerge0.0811.100
Rpim0.0300.423
Number of reflections246832411
<I/σ(I)>25.11.8
Completeness [%]99.999.7
Redundancy9.48.7
CC(1/2)0.9990.738
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP62980.1 M Bis-Tris pH 6.0, 21.4 % PEG3350, 0.07 M MgCl2, 0.002 M MnCl2, 300 nl sitting drops (sample:well, 1:2 ratio)

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