6F1K
Structure of ARTD2/PARP2 WGR domain bound to double strand DNA without 5'phosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-05-03 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.98 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 119.270, 119.270, 73.580 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.980 - 2.200 |
R-factor | 0.21573 |
Rwork | 0.214 |
R-free | 0.24980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PARP2 homology model |
RMSD bond length | 0.010 |
RMSD bond angle | 1.480 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.400 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.080 | 1.557 |
Rmeas | 0.085 | 1.550 |
Number of reflections | 16127 | |
<I/σ(I)> | 19.19 | 1.6 |
Completeness [%] | 99.9 | 99.7 |
Redundancy | 9.71 | 10 |
CC(1/2) | 1.000 | 0.690 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.9 | 277 | PEG MME 5000 0.1 M Na-acetate ethylene glyco |