6EZI
PDZK1 domain 4 in complex with C-terminal peptide of human PepT2.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID30B |
| Synchrotron site | ESRF |
| Beamline | ID30B |
| Temperature [K] | 173 |
| Detector technology | PIXEL |
| Collection date | 2017-02-13 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 1.07166 |
| Spacegroup name | P 65 2 2 |
| Unit cell lengths | 54.400, 54.400, 150.760 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 47.112 - 1.503 |
| R-factor | 0.194841046699 |
| Rwork | 0.194 |
| R-free | 0.21420 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4r2z |
| RMSD bond length | 0.007 |
| RMSD bond angle | 0.836 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 47.120 | 1.590 |
| High resolution limit [Å] | 1.500 | 1.500 |
| Rmerge | 0.066 | 0.963 |
| Rmeas | 0.067 | 0.977 |
| Number of reflections | 21856 | 3421 |
| <I/σ(I)> | 33.85 | 4.2 |
| Completeness [%] | 99.7 | 99.3 |
| Redundancy | 35 | 34.8 |
| CC(1/2) | 0.776 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 292.15 | 0.1 M Trisodium citrate pH 6.45 20% PEG 4000 20 %(v/v) isopropanol |
