6ET6
Crystal structure of muramidase from Acinetobacter baumannii AB 5075UW prophage
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-01 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.8 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 30.980, 67.000, 75.760 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.180 - 1.200 |
R-factor | 0.1485 |
Rwork | 0.147 |
R-free | 0.16850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2anv |
RMSD bond length | 0.019 |
RMSD bond angle | 1.901 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.5.31) |
Phasing software | MOLREP |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.180 | 50.180 | 1.220 |
High resolution limit [Å] | 1.200 | 6.570 | 1.200 |
Rmerge | 0.113 | 0.042 | 0.929 |
Rmeas | 0.126 | 0.046 | 1.039 |
Rpim | 0.054 | 0.018 | 0.452 |
Number of reflections | 46812 | 309 | 2300 |
<I/σ(I)> | 5.6 | ||
Completeness [%] | 94.1 | 84.5 | 94.6 |
Redundancy | 5 | 5.5 | 5 |
CC(1/2) | 0.994 | 0.998 | 0.762 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 0.2M Li2SO4; 0.1M MES pH 6.5; 25% PEG3350 |