6ERC
Peroxidase A from Dictyostelium discoideum (DdPoxA)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-25 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 1.072 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 128.253, 128.253, 146.015 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.672 - 2.500 |
R-factor | 0.228760684094 |
Rwork | 0.228 |
R-free | 0.25674 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.547 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | BALBES |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.672 | 2.589 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.315 | 4.140 |
Rmeas | 0.332 | 4.372 |
Rpim | 0.104 | 1.395 |
Number of reflections | 48501 | 4813 |
<I/σ(I)> | 7.64 | 0.6 |
Completeness [%] | 99.9 | 99.98 |
Redundancy | 10 | 9.7 |
CC(1/2) | 0.995 | 0.298 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 295.15 | 0.2 M BIS-TRIS, pH 5.5, 0.2 M MgSO4, 23.2% PEG 3350 |