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6EOB

Crystal structure of AMPylated GRP78 in apo form (Crystal form 1)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2017-09-14
DetectorDECTRIS PILATUS 300K
Wavelength(s)0.969
Spacegroup nameP 21 21 21
Unit cell lengths64.650, 69.070, 122.230
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution61.120 - 2.000
R-factor0.24014
Rwork0.238
R-free0.27955
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5o4p
RMSD bond length0.007
RMSD bond angle1.151
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]61.1202.050
High resolution limit [Å]2.0002.000
Rmerge0.1581.310
Rpim0.0940.782
Number of reflections377582743
<I/σ(I)>8.51.5
Completeness [%]99.9100
Redundancy7.17.2
CC(1/2)0.9950.522
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29320% PEG1000, 0.1M NaKHPO4, PH6.2, 0.1M NaCl

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