Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6EMY

Structure of the Tn1549 transposon Integrase (aa 82-397, Y379F) in complex with transposon right end DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP13 (MX1)
Temperature [K]100
Detector technologyPIXEL
Collection date2013-09-28
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.977315
Spacegroup nameP 1 21 1
Unit cell lengths77.230, 121.681, 77.234
Unit cell angles90.00, 118.12, 90.00
Refinement procedure
Resolution38.597 - 2.500
R-factor0.1625
Rwork0.161
R-free0.18390
Structure solution methodSAD
RMSD bond length0.005
RMSD bond angle0.767
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareAutoSol
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]45.3802.8702.640
High resolution limit [Å]2.5002.8002.500
Rmerge0.0650.835
Rpim0.0390.493
Number of reflections4191646186187
<I/σ(I)>11.71.351.6
Completeness [%]96.598.298
Redundancy3.83.53.8
CC(1/2)0.9990.5470.659
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION29313% (v/v) PEG 3350, 0.25 M NaCl
2VAPOR DIFFUSION29313% (v/v) PEG 3350, 0.25 M NaCl

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon