6EMV
Crystal Structure of dual specific Trm10 construct from Thermococcus kodakaraensis.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-04-23 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9801 |
Spacegroup name | P 61 |
Unit cell lengths | 71.082, 71.082, 192.233 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.392 - 2.900 |
R-factor | 0.196476138728 |
Rwork | 0.194 |
R-free | 0.25048 |
Starting model (for MR) | previously solved structure ( unpublished) |
RMSD bond length | 0.002 |
RMSD bond angle | 0.478 |
Data reduction software | XDS (2015-10-15) |
Data scaling software | XDS (2015-10-15) |
Phasing software | PHASER (2.5.5) |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.392 | 2.999 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.193 | 1.135 |
Rmeas | 0.204 | 1.203 |
Rpim | 0.068 | 0.398 |
Number of reflections | 12193 | 1223 |
<I/σ(I)> | 9.88 | 1.65 |
Completeness [%] | 99.9 | 99.67 |
Redundancy | 9.1 | 9.1 |
CC(1/2) | 0.996 | 0.659 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 293 | 10% PEG6000, 0.2M LiCl and 0.1M NaAc pH 5.5 |