6EKX
Direct-evolutioned unspecific peroxygenase from Agrocybe aegerita, in complex with 1-naphthol (I)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-12-17 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 51.086, 57.799, 60.691 |
Unit cell angles | 90.00, 109.89, 90.00 |
Refinement procedure
Resolution | 48.040 - 1.130 |
R-factor | 0.16642 |
Rwork | 0.166 |
R-free | 0.17536 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5oxu |
RMSD bond length | 0.006 |
RMSD bond angle | 1.351 |
Data reduction software | XDS (0.72) |
Data scaling software | Aimless (0.5.32) |
Phasing software | MOLREP (11.5.02) |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.040 | 1.140 |
High resolution limit [Å] | 1.130 | 1.130 |
Rmerge | 0.066 | 0.605 |
Rpim | 0.028 | 0.369 |
Number of reflections | 124527 | 5458 |
<I/σ(I)> | 13.1 | 2 |
Completeness [%] | 99.0 | |
Redundancy | 5.9 | |
CC(1/2) | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 291 | 1.6M sodium potassium phosphate pH 5.6, 3% MPD, soaking 100mM 1-Naphthol, 20% methanol |