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6EEP

Crystal Structure of Ribose-5-phosphate Isomerase from Legionella pneumophila

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2018-06-28
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97872
Spacegroup nameC 1 2 1
Unit cell lengths104.630, 67.930, 74.000
Unit cell angles90.00, 119.54, 90.00
Refinement procedure
Resolution32.190 - 1.850
R-factor0.1613
Rwork0.158
R-free0.21640
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4x84
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMoRDa
Refinement softwarePHENIX ((1.14_3219))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]32.19032.1901.900
High resolution limit [Å]1.8508.2701.850
Rmerge0.0580.0320.548
Rmeas0.0670.0370.626
Total number of observations155837
Number of reflections378534422820
<I/σ(I)>13.9731.972.54
Completeness [%]97.795.597.3
Redundancy4.1173.6474.242
CC(1/2)0.9980.9970.813
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5290LepnA.00944.a.B1.PS38423 at 22.85 mg/ml was mixed 1:1 with MCSG1(B8): 25.5% (w/v) PEG-4,000, 15% (v/v) Glycerol, 0.085 M Tris Base / Hydrochloric, 0.17 M Sodium Acetate, pH = 8.5. Tray: 300294b8. Puck: jve-8

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PDB entries from 2024-08-07

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