6EDE
tRNA 2'-phosphotransferase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-08-02 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9791 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 53.284, 53.284, 308.393 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 46.145 - 1.553 |
R-factor | 0.1735 |
Rwork | 0.173 |
R-free | 0.18760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6e3a |
RMSD bond length | 0.005 |
RMSD bond angle | 0.853 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.590 |
High resolution limit [Å] | 1.550 | 1.550 |
Rpim | 0.014 | 0.208 |
Number of reflections | 39099 | |
<I/σ(I)> | 56.6 | 2.8 |
Completeness [%] | 99.3 | 85.8 |
Redundancy | 17.7 | |
CC(1/2) | 0.999 | 0.884 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 0.1M MES pH 6.0, 10 %MPD |