6ECM
Crystal Structure of SNX15 PX domain in domain swapped conformation
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-08-01 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9796 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 54.498, 54.498, 83.580 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.000 - 2.353 |
R-factor | 0.2499 |
Rwork | 0.244 |
R-free | 0.29890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ikd |
RMSD bond length | 0.006 |
RMSD bond angle | 1.036 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.000 | 2.430 |
High resolution limit [Å] | 2.350 | 2.350 |
Rmerge | 0.076 | 1.074 |
Rpim | 0.015 | 0.216 |
Number of reflections | 5645 | 505 |
<I/σ(I)> | 20.9 | 3.1 |
Completeness [%] | 99.4 | 94.3 |
Redundancy | 26.2 | 24.6 |
CC(1/2) | 1.000 | 0.982 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 0.1 M Tris (pH 8.5) 200 mM LiSO4, 24% PEG4000, 10% glycerol |