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6ECD

Vlm2 thioesterase domain with genetically encoded 2,3-diaminopropionic acid bound with a tetradepsipeptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2017-03-13
DetectorDECTRIS PILATUS 6M-F
Wavelength(s).9792
Spacegroup nameP 4 3 2
Unit cell lengths152.298, 152.298, 152.298
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution107.690 - 1.900
R-factor0.1895
Rwork0.188
R-free0.21410
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6ecb
RMSD bond length0.017
RMSD bond angle1.401
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]107.6901.940
High resolution limit [Å]1.9001.900
Rmerge0.123
Rmeas0.124
Rpim0.020
Number of reflections480633071
<I/σ(I)>23.3
Completeness [%]100.0
Redundancy37.2
CC(1/2)1.000
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP82951.65 M DL-malic acid, pH 8.0, 25 mM HEPES, pH 8.0, 100 mM sodium chloride, 0.2 mM TCEP

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