6EBG
Ohr (Organic Hydroperoxide Resistance protein) mutant - C60S interacting with dihydrolipoamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2016-04-19 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 61 |
Unit cell lengths | 88.646, 88.646, 180.107 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.800 - 2.150 |
R-factor | 0.20227 |
Rwork | 0.201 |
R-free | 0.23595 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6eb4 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.780 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.800 | 2.220 |
High resolution limit [Å] | 2.150 | 2.150 |
Rmeas | 0.227 | 5.789 |
Rpim | 0.070 | 1.913 |
Number of reflections | 40280 | 3786 |
<I/σ(I)> | 14.1 | |
Completeness [%] | 92.5 | 99.9 |
Redundancy | 19.8 | 17.9 |
CC(1/2) | 0.999 | 0.463 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291.15 | Purified Ohr_C60S protein 10mg/ml in 5mM Tris-Hcl pH 7.4 Crystallisation conditions: Magnesium Clhoride 200mM, BIS-TRIS 100mM pH 5.5, PEG 3,350 25%w/v crystal was soaked overnight in Lipoamide 5mM, solved in 5% ethanol and Crystallisation condition |