6EB4
OhrB (Organic Hydroperoxide Resistance protein) from Chromobacterium violaceum
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | LNLS BEAMLINE D03B-MX1 |
Synchrotron site | LNLS |
Beamline | D03B-MX1 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2014-10-13 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.458660 |
Spacegroup name | P 61 |
Unit cell lengths | 87.269, 87.269, 178.779 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 35.000 - 2.100 |
R-factor | 0.19338 |
Rwork | 0.192 |
R-free | 0.22033 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1n2f |
RMSD bond length | 0.015 |
RMSD bond angle | 1.754 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.800 | 2.160 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.070 | 2.610 |
Rmeas | 0.080 | 2.460 |
Rpim | 0.030 | 1.160 |
Number of reflections | 43780 | 3282 |
<I/σ(I)> | 22.5 | 0.9 |
Completeness [%] | 97.5 | 89.3 |
Redundancy | 14.3 | 8.5 |
CC(1/2) | 0.990 | 0.370 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 291.15 | Purified protein at 10mg/ml diluted in 5mM Tris-Hcl pH 7.4 Crystallisation condition: Magnesium Clhoride 200mM, BIS-TRIS 100mM pH 5.5, PEG 3,350 25%w/v |