6E8L
Crystal Structure of Alkyl hydroperoxidase D (AhpD) from Streptococcus pneumoniae (Strain D39/ NCTC 7466)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
| Synchrotron site | Australian Synchrotron |
| Beamline | MX2 |
| Temperature [K] | 110 |
| Detector technology | PIXEL |
| Collection date | 2018-07-06 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.953717 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 65.296, 84.233, 183.846 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 45.000 - 2.300 |
| Rwork | 0.196 |
| R-free | 0.24200 |
| Data reduction software | MOSFLM |
| Data scaling software | Aimless |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 45.000 | 2.540 |
| High resolution limit [Å] | 2.300 | 2.440 |
| Rmerge | 0.096 | 0.472 |
| Rmeas | 0.106 | 0.518 |
| Rpim | 0.044 | 0.212 |
| Number of reflections | 45900 | 4142 |
| <I/σ(I)> | 10.5 | 3.2 |
| Completeness [%] | 99.3 | 96 |
| Redundancy | 5.7 | |
| CC(1/2) | 0.998 | 0.859 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 281.15 | 0.1 M Bis-tris propane, 0.2 M Magnesium chloride hexahydrate, 25% w/v PEG 3350, 6% v/v 1,2-Propandiol |






