6E8C
Crystal structure of the double homeodomain of DUX4 in complex with DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-30 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9668 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 67.190, 73.140, 108.560 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.024 - 2.120 |
R-factor | 0.201 |
Rwork | 0.198 |
R-free | 0.24690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3lnq |
RMSD bond length | 0.011 |
RMSD bond angle | 1.116 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.27) |
Phasing software | PHASER |
Refinement software | PHENIX ((dev_3126: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 54.180 | 2.200 |
High resolution limit [Å] | 2.120 | 2.120 |
Rmerge | 0.054 | 1.370 |
Rmeas | 0.066 | |
Rpim | 0.037 | |
Number of reflections | 15112 | |
<I/σ(I)> | 14 | |
Completeness [%] | 93.9 | 83 |
Redundancy | 3 | 13.6 |
CC(1/2) | 0.996 | 0.851 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 25% PEG 3350 0.1M Bis-TRIS pH 6.5 5% glycerol |