6E8A
Crystal structure of DcrB from Salmonella enterica at 1.92 Angstroms resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-08-20 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.97851 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 41.715, 41.715, 533.438 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.490 - 1.920 |
R-factor | 0.2226 |
Rwork | 0.222 |
R-free | 0.23460 |
Structure solution method | MAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.218 |
Data reduction software | XDS (Jan 26, 2018) |
Data scaling software | Aimless (0.7.1) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0230) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.500 | 1.950 |
High resolution limit [Å] | 1.920 | 1.920 |
Rmerge | 0.097 | 1.790 |
Rmeas | 0.099 | 1.820 |
Rpim | 0.017 | 0.310 |
Number of reflections | 22978 | 1086 |
<I/σ(I)> | 21.2 | 2.2 |
Completeness [%] | 99.2 | 100 |
Redundancy | 36.4 | 32.7 |
CC(1/2) | 0.998 | 0.885 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.6 | 298 | 2.0 M ammonium sulfate, 100 mM Tris pH 8.6 |