6E87
Crystal structure of ferrous form of the crosslinked human cysteine dioxygenase in the anaerobic condition
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-11-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 65 |
Unit cell lengths | 131.706, 131.706, 34.325 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.111 - 1.952 |
R-factor | 0.1728 |
Rwork | 0.171 |
R-free | 0.19730 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ic1 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.980 |
High resolution limit [Å] | 1.950 | 5.290 | 1.950 |
Rmerge | 0.136 | 0.072 | 0.677 |
Rmeas | 0.148 | 0.079 | 0.768 |
Rpim | 0.058 | 0.031 | 0.352 |
Total number of observations | 157183 | ||
Number of reflections | 25141 | 1353 | 1169 |
<I/σ(I)> | 4.8 | ||
Completeness [%] | 99.5 | 99.9 | 94.1 |
Redundancy | 6.3 | 6.5 | 4.1 |
CC(1/2) | 0.996 | 0.746 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 0.1 M MES, 2 M ammonium sulfate, 2% PEG400 |