6E5X
Crystal structure of Ebola virus VP30 C-terminus/RBBP6 peptide complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-08-25 |
Detector | NOIR-1 |
Wavelength(s) | 1.00003 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 45.600, 45.600, 158.710 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.830 - 1.500 |
R-factor | 0.19109 |
Rwork | 0.189 |
R-free | 0.23021 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5vap |
RMSD bond length | 0.002 |
RMSD bond angle | 0.659 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0230) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.830 | 1.530 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.050 | 0.020 |
Rmeas | 0.050 | 0.020 |
Number of reflections | 27964 | 1327 |
<I/σ(I)> | 30.4 | 0.7 |
Completeness [%] | 100.0 | 99.3 |
Redundancy | 16.7 | 10.5 |
CC(1/2) | 0.300 | 0.300 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 0.2 M calcium acetate hydrate, 0.1 M sodium cacodylate trihydrate, pH 6.5, 18% w/v PEG8000 |