6E5T
Crystal structure of human cellular retinol binding protein 1 in complex with abnormal-cannabidiorcin (Abn-CBDO)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2018-05-11 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 37.319, 40.739, 92.079 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.586 - 1.550 |
R-factor | 0.1788 |
Rwork | 0.176 |
R-free | 0.22420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5h8t |
RMSD bond length | 0.009 |
RMSD bond angle | 1.042 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.040 | 1.580 |
High resolution limit [Å] | 1.550 | 1.550 |
Rpim | 0.039 | 0.360 |
Number of reflections | 20911 | |
<I/σ(I)> | 12.8 | 2.9 |
Completeness [%] | 99.2 | 99.5 |
Redundancy | 11.9 | |
CC(1/2) | 1.000 | 0.660 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 297 | 0.1 m BisTris, pH 5.5, 25% PEG 3350 |