6E3F
The structure of the C-terminal domains (C123) of Streptococcus intermedius antigen I/II (Pas)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-08-17 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9719 |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 99.589, 99.589, 514.887 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.610 - 2.700 |
R-factor | 0.2163 |
Rwork | 0.215 |
R-free | 0.24440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3qe5 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.631 |
Data reduction software | HKL-2000 (2.3.7) |
Data scaling software | HKL-2000 (2.3.7) |
Phasing software | MOLREP (10.2.36) |
Refinement software | REFMAC (5.8.0230) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.750 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.124 | |
Rmeas | 0.129 | |
Rpim | 0.041 | 0.443 |
Total number of observations | 531423 | |
Number of reflections | 36912 | 1786 |
<I/σ(I)> | 6.3 | 2.05 |
Completeness [%] | 100.0 | 100 |
Redundancy | 14.4 | 14.8 |
CC(1/2) | 0.737 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.8 | 295 | 100 mM Citrate, pH 5.8, 200 mM Ammonium sulfate, 900 mM Lithium sulfate |