6E0A
Crystal Structure of Helicobacter pylori TlpA Chemoreceptor Ligand Binding Domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2013-01-30 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 72.779, 59.468, 77.723 |
Unit cell angles | 90.00, 114.09, 90.00 |
Refinement procedure
Resolution | 33.219 - 2.430 |
R-factor | 0.1998 |
Rwork | 0.197 |
R-free | 0.25660 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.480 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 70.000 | 2.470 |
High resolution limit [Å] | 2.430 | 2.430 |
Rmerge | 0.038 | 0.177 |
Rpim | 0.023 | 0.132 |
Number of reflections | 83485 | |
<I/σ(I)> | 31.3 | 2.8 |
Completeness [%] | 99.7 | 95.9 |
Redundancy | 3.6 | |
CC(1/2) | 1.000 | 0.940 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 277 | 14.4% PEG 8000, 80mM NaCacodylate pH 6.5, 0.16M ZnOAc, with 20% glycerol as a cryoprotectant. |