6DZD
Crystal structure of Bacillus licheniformis hypothetical protein YfiH
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SEALED TUBE |
Source details | BRUKER D8 QUEST |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-08-30 |
Detector | APEX II CCD |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 42.567, 69.464, 179.589 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 54.940 - 2.660 |
R-factor | 0.2161 |
Rwork | 0.214 |
R-free | 0.24780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1t8h |
RMSD bond length | 0.008 |
RMSD bond angle | 1.016 |
Data reduction software | SAINT |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER (2.5.1) |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 54.940 | 2.790 |
High resolution limit [Å] | 2.660 | 2.660 |
Rmerge | 0.247 | 0.573 |
Rmeas | 0.297 | 0.727 |
Rpim | 0.163 | 0.441 |
Number of reflections | 16046 | 2073 |
<I/σ(I)> | 4.5 | 1.5 |
Completeness [%] | 99.9 | 100 |
Redundancy | 5.9 | 4.9 |
CC(1/2) | 0.951 | 0.705 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8.5 | 291.15 | 200 mM calcium chloride, 100 mM Tris-HCl pH 8.5 and 20% PEG 4000 |