6DY6
Mn(II)-bound structure of the engineered cyt cb562 variant, CH2E
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-22 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 35.720, 49.000, 117.530 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.634 - 1.800 |
R-factor | 0.2151 |
Rwork | 0.210 |
R-free | 0.26040 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2bc5 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.029 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.730 | 1.849 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.093 | 0.374 |
Number of reflections | 19742 | 1931 |
<I/σ(I)> | 12 | 2.5 |
Completeness [%] | 99.3 | 99.6 |
Redundancy | 11.1 | 9.7 |
CC(1/2) | 0.997 | 0.865 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | Drop consists of 1 uL of 30% PEG 400, 200 mM Ammonium Acetate and 0.1 M Tris (pH 8.5) mixed with 1 uL of 2.5 mM protein and 2 mM Manganese(II) Chloride |