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6DXP

The crystal structure of an FMN-dependent NADH-azoreductase from Klebsiella pneumoniae

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]100
Detector technologyCCD
Collection date2018-02-07
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.97931
Spacegroup nameC 1 2 1
Unit cell lengths133.668, 97.323, 77.534
Unit cell angles90.00, 90.71, 90.00
Refinement procedure
Resolution20.000 - 2.478
R-factor0.2396
Rwork0.237
R-free0.28490
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1v4b
RMSD bond length0.010
RMSD bond angle1.589
Data reduction softwareMOSFLM
Data scaling softwareSCALA (0.5.32)
Phasing softwareMOLREP
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]29.17029.1702.610
High resolution limit [Å]2.4787.8402.480
Rmerge0.1000.0290.642
Rmeas0.1170.0340.777
Rpim0.0600.0180.432
Number of reflections3487611364695
<I/σ(I)>5.6
Completeness [%]98.697.291.5
Redundancy3.73.63.1
CC(1/2)0.9960.9980.736
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION62910.1M MES pH 6.0, 25% PEG 8000, 0.2M calcium acetate

222036

PDB entries from 2024-07-03

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