6DXN
1.95 Angstrom Resolution Crystal Structure of DsbA Disulfide Interchange Protein from Klebsiella pneumoniae.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-04-11 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 1 |
Unit cell lengths | 42.401, 42.392, 103.949 |
Unit cell angles | 90.27, 89.78, 96.00 |
Refinement procedure
Resolution | 27.010 - 1.950 |
R-factor | 0.18213 |
Rwork | 0.180 |
R-free | 0.22982 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ocf |
RMSD bond length | 0.006 |
RMSD bond angle | 1.133 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | MrBUMP |
Refinement software | REFMAC (5.8.0230) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.980 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.135 | 0.786 |
Rmeas | 0.154 | 0.897 |
Rpim | 0.073 | 0.430 |
Number of reflections | 51946 | 2517 |
<I/σ(I)> | 16.8 | 2.7 |
Completeness [%] | 97.8 | 96.3 |
Redundancy | 4.4 | 4.3 |
CC(1/2) | 0.726 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 292 | Protein: 9.6mg/ml, 0.01M Tris-HCl pH 8.3; Screen: PEGs II (B9), 0.1M Tris-HCl pH 8.5, 30% (v/v) PEG 400. |