6DVU
Structure of the Monoclinic-1 (Monocl-1) Crystal Form of Human Apolipoprotein C1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 298 |
Detector technology | AREA DETECTOR |
Collection date | 1992-06-15 |
Detector | SDMS |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 29.541, 46.739, 33.880 |
Unit cell angles | 90.00, 95.16, 90.00 |
Refinement procedure
Resolution | 33.000 - 1.800 |
R-factor | 0.22426 |
Rwork | 0.221 |
R-free | 0.27626 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1rop |
RMSD bond length | 0.009 |
RMSD bond angle | 1.049 |
Data reduction software | UCSD-system |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.000 | 1.950 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.094 | 0.457 |
Rmeas | 0.114 | 0.721 |
Rpim | 0.055 | 0.315 |
Number of reflections | 7315 | 613 |
<I/σ(I)> | 6.7 | 3.2 |
Completeness [%] | 85.2 | 76 |
Redundancy | 7.2 | 4.5 |
CC(1/2) | 0.993 | 0.640 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 298 | Crystallized in Cryschem sitting drop plates with reservoirs of 16%-18% 2-methyl-2,4-pentanediol (MPD), 0.1 M sodium acetate and 0.25% octyl-beta-s-1-thioglucopyanoside. The drops were composed of equal amounts of 8 mg/ml protein in 0.02 ammonium bicarbonate and reservoir. |