Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6DS9

Elongated version of a de novo designed three helix bundle structure (GRa3D)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-G
Synchrotron siteAPS
Beamline21-ID-G
Temperature [K]100
Detector technologyCCD
Collection date2015-12-17
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97856
Spacegroup nameH 3
Unit cell lengths46.396, 46.396, 109.303
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution9.230 - 1.340
R-factor0.18
Rwork0.180
R-free0.18600
Structure solution methodSAD
RMSD bond length0.010
RMSD bond angle0.920
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareBUSTER (2.10.3)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.360
High resolution limit [Å]1.3403.6401.340
Rmerge0.0330.0200.324
Rmeas0.0370.0230.377
Rpim0.0160.0100.189
Total number of observations107459
Number of reflections19532944832
<I/σ(I)>16.2
Completeness [%]98.894.882.1
Redundancy5.55.53.6
CC(1/2)0.9990.945
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72932.1 M Disodium DL Malate 200 mM Sodium Thiosulfate

247947

PDB entries from 2026-01-21

PDB statisticsPDBj update infoContact PDBjnumon