Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6DRU

Xylosidase from Aspergillus niger

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-G
Synchrotron siteAPS
Beamline21-ID-G
Temperature [K]100
Detector technologyCCD
Collection date2013-11-17
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97856
Spacegroup nameP 32 2 1
Unit cell lengths146.132, 146.132, 220.081
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution47.915 - 2.700
R-factor0.1818
Rwork0.181
R-free0.21250
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2xvg
RMSD bond length0.002
RMSD bond angle0.531
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.91547.9152.390
High resolution limit [Å]2.2606.7102.260
Rmerge0.5250.074
Rmeas0.5410.076
Total number of observations2108169
Number of reflections124948516317700
<I/σ(I)>5.7138.130.03
Completeness [%]97.599.686.3
Redundancy16.87220.2793.761
CC(1/2)0.9830.999
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP3.5293.155% v/v 2-Propanol, 0.1 M Citric acid pH 3.5, 6% w/v Polyethylene glycol 20,000

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon