Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6DR1

YopH PTP1B Chimera 2 PTPase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL14-1
Synchrotron siteSSRL
BeamlineBL14-1
Temperature [K]100
Detector technologyCCD
Collection date2017-04-13
DetectorMARMOSAIC 325 mm CCD
Wavelength(s)1.127
Spacegroup nameP 21 21 21
Unit cell lengths51.145, 53.181, 95.712
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.204 - 2.500
R-factor0.2192
Rwork0.217
R-free0.25530
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)pdbid 4YAA
RMSD bond length0.002
RMSD bond angle0.514
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.590
High resolution limit [Å]2.5005.3802.500
Rmerge0.4040.1232.179
Rmeas0.4270.1302.320
Rpim0.1370.0430.781
Number of reflections96051054922
<I/σ(I)>31.1
Completeness [%]99.799.397.4
Redundancy9.69.38.5
CC(1/2)0.9960.507
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1EVAPORATION7.5298Hepes, PEG 3350

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon