6DR1
YopH PTP1B Chimera 2 PTPase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL14-1 |
Synchrotron site | SSRL |
Beamline | BL14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-04-13 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 1.127 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 51.145, 53.181, 95.712 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.204 - 2.500 |
R-factor | 0.2192 |
Rwork | 0.217 |
R-free | 0.25530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdbid 4YAA |
RMSD bond length | 0.002 |
RMSD bond angle | 0.514 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.590 |
High resolution limit [Å] | 2.500 | 5.380 | 2.500 |
Rmerge | 0.404 | 0.123 | 2.179 |
Rmeas | 0.427 | 0.130 | 2.320 |
Rpim | 0.137 | 0.043 | 0.781 |
Number of reflections | 9605 | 1054 | 922 |
<I/σ(I)> | 3 | 1.1 | |
Completeness [%] | 99.7 | 99.3 | 97.4 |
Redundancy | 9.6 | 9.3 | 8.5 |
CC(1/2) | 0.996 | 0.507 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 7.5 | 298 | Hepes, PEG 3350 |