Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6DNL

Crystal Structure of Neisseria meningitidis DsbD c-terminal domain in the reduced form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyCCD
Collection date2016-09-30
DetectorADSC QUANTUM 210r
Wavelength(s)0.95370
Spacegroup nameP 1 21 1
Unit cell lengths43.250, 28.060, 45.800
Unit cell angles90.00, 100.96, 90.00
Refinement procedure
Resolution34.298 - 1.700
R-factor0.1789
Rwork0.177
R-free0.21340
Structure solution methodMOLECULAR REPLACEMENT
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.3.22)
Phasing softwarePHASER
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]44.96534.2981.790
High resolution limit [Å]1.7005.3801.700
Rmerge0.0530.531
Rmeas0.1160.0620.614
Rpim0.0590.0310.306
Number of reflections121504181750
<I/σ(I)>7.512.61.4
Completeness [%]99.89999.9
Redundancy3.83.63.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION7.52930.2 M zinc acetate dehydrate, 0.1 M sodium cacodylate trihydrate pH 7.5 and 18% w/v PEG 8000

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon