Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6DGN

Cronobacter turicensis BDSF synthase RpfF in complex with the RpfR quorum-sensing receptor FI domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]93
Detector technologyPIXEL
Collection date2017-12-13
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97946
Spacegroup nameH 3 2
Unit cell lengths144.939, 144.939, 116.910
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution41.840 - 1.999
R-factor0.1699
Rwork0.168
R-free0.20120
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.593
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.030
High resolution limit [Å]1.9995.4301.999
Rmerge0.1490.0511.572
Rmeas0.1530.0521.611
Rpim0.0340.0110.350
Number of reflections3195116791573
<I/σ(I)>17.54
Completeness [%]100.099.9100
Redundancy20.221.321.1
CC(1/2)0.8251.0000.825
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.6293100 mM sodium acetate (pH 5.6) and 250 mM ammonium phosphate dibasic

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon