6DGN
Cronobacter turicensis BDSF synthase RpfF in complex with the RpfR quorum-sensing receptor FI domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 93 |
Detector technology | PIXEL |
Collection date | 2017-12-13 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | H 3 2 |
Unit cell lengths | 144.939, 144.939, 116.910 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 41.840 - 1.999 |
R-factor | 0.1699 |
Rwork | 0.168 |
R-free | 0.20120 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.593 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.030 |
High resolution limit [Å] | 1.999 | 5.430 | 1.999 |
Rmerge | 0.149 | 0.051 | 1.572 |
Rmeas | 0.153 | 0.052 | 1.611 |
Rpim | 0.034 | 0.011 | 0.350 |
Number of reflections | 31951 | 1679 | 1573 |
<I/σ(I)> | 17.54 | ||
Completeness [%] | 100.0 | 99.9 | 100 |
Redundancy | 20.2 | 21.3 | 21.1 |
CC(1/2) | 0.825 | 1.000 | 0.825 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 293 | 100 mM sodium acetate (pH 5.6) and 250 mM ammonium phosphate dibasic |