Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6DFU

Tryptophan--tRNA ligase from Haemophilus influenzae.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-BM
Synchrotron siteAPS
Beamline19-BM
Temperature [K]100
Detector technologyCCD
Collection date2017-07-13
DetectorADSC QUANTUM 210r
Wavelength(s)0.9792
Spacegroup nameP 1 21 1
Unit cell lengths70.294, 48.677, 99.322
Unit cell angles90.00, 101.13, 90.00
Refinement procedure
Resolution35.500 - 2.050
R-factor0.1897
Rwork0.187
R-free0.23800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3n9i
RMSD bond length0.013
RMSD bond angle1.558
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareHKL-3000
Refinement softwareREFMAC (5.8.0189)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.090
High resolution limit [Å]2.0505.5602.050
Rmerge0.1220.0650.642
Rmeas0.1410.0760.760
Rpim0.0710.0390.401
Total number of observations160897
Number of reflections4219622032071
<I/σ(I)>8.9
Completeness [%]99.998.999.3
Redundancy3.83.73.4
CC(1/2)0.9930.875
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.62890.1 M potassium thiocyanate, 30% PEG MME 2000, 10 mM tryptophane

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon