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6DFC

Kaiso (ZBTB33) zinc finger DNA binding domain in complex with the specific Kaiso binding sequence (KBS) with a T-to-U substitution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2014-12-13
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.03320
Spacegroup nameC 2 2 2
Unit cell lengths44.240, 184.451, 104.705
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.020 - 1.850
R-factor0.1893
Rwork0.187
R-free0.20790
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4f6m
RMSD bond length0.009
RMSD bond angle1.162
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX (1.9_1692)
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]43.0201.920
High resolution limit [Å]1.8501.850
Rmerge0.087
Rmeas0.093
Number of reflections365733333
<I/σ(I)>17.741.84
Completeness [%]98.289.31
Redundancy9.46.8
CC(1/2)0.9960.612
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.22950.2 M Disodium Tartrate, 20 % PEG 3350

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