6DED
Crystal structure of the C-terminal ARM domain of Homo sapiens SPIN90 (SH3-protein interacting with Nck), residues 351-722
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-BM |
Synchrotron site | APS |
Beamline | 19-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-08-03 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9797423 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 76.365, 76.170, 92.257 |
Unit cell angles | 90.00, 93.12, 90.00 |
Refinement procedure
Resolution | 35.699 - 2.204 |
R-factor | 0.216 |
Rwork | 0.215 |
R-free | 0.23910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | SAD model |
RMSD bond length | 0.003 |
RMSD bond angle | 0.595 |
Data reduction software | HKL-3000 (2.3.10) |
Data scaling software | HKL-3000 (2.3.10) |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.240 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmeas | 0.147 | |
Rpim | 0.087 | |
Number of reflections | 53032 | 2657 |
<I/σ(I)> | 18 | 1.3 |
Completeness [%] | 99.3 | 98.6 |
Redundancy | 4.7 | 3.8 |
CC(1/2) | 0.302 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 50 mM Tris, pH 7.5, 700 mM sodium potassium tartrate |