Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6DED

Crystal structure of the C-terminal ARM domain of Homo sapiens SPIN90 (SH3-protein interacting with Nck), residues 351-722

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-BM
Synchrotron siteAPS
Beamline19-BM
Temperature [K]100
Detector technologyCCD
Collection date2016-08-03
DetectorADSC QUANTUM 315r
Wavelength(s)0.9797423
Spacegroup nameP 1 21 1
Unit cell lengths76.365, 76.170, 92.257
Unit cell angles90.00, 93.12, 90.00
Refinement procedure
Resolution35.699 - 2.204
R-factor0.216
Rwork0.215
R-free0.23910
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)SAD model
RMSD bond length0.003
RMSD bond angle0.595
Data reduction softwareHKL-3000 (2.3.10)
Data scaling softwareHKL-3000 (2.3.10)
Phasing softwarePHASER (2.5.6)
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.240
High resolution limit [Å]2.2002.200
Rmeas0.147
Rpim0.087
Number of reflections530322657
<I/σ(I)>181.3
Completeness [%]99.398.6
Redundancy4.73.8
CC(1/2)0.302
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.529350 mM Tris, pH 7.5, 700 mM sodium potassium tartrate

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon