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6D9N

Crystal structure of an organic hydroperoxide resistance protein from Elizabethkingia anophelis with crystallant-derived thiocyanate bound

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2017-10-18
DetectorRAYONIX MX-300
Wavelength(s)0.97872
Spacegroup nameP 1 21 1
Unit cell lengths47.390, 50.030, 57.980
Unit cell angles90.00, 102.63, 90.00
Refinement procedure
Resolution40.394 - 1.200
R-factor0.141
Rwork0.141
R-free0.15750
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1n2f
RMSD bond length0.011
RMSD bond angle1.287
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX ((dev_3092: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.230
High resolution limit [Å]1.2005.3701.200
Rmerge0.0470.0260.572
Rmeas0.0540.0300.660
Number of reflections824499766071
<I/σ(I)>15.1343.572.45
Completeness [%]99.699.199.1
Redundancy4.0763.9014.02
CC(1/2)0.9990.9980.861
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.929026.04 mg/mL ElanA.00074.a.B1.PW38309 + MCSG1 D4 (294273d4) (200 mM sodium thiocyanate, pH 6.9, 20% w/v PEG3350), cryoprotectant: 15% ethylene glycol, puck id hay3-7

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PDB entries from 2024-10-09

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