6D9E
Crystal structure of Corynebacterium diphtheriae UDP-galactopyranose mutase in complex with UDP-GlcNAc (open, reduced)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-03-13 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97856 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 97.170, 97.170, 128.860 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.422 - 2.850 |
R-factor | 0.1681 |
Rwork | 0.166 |
R-free | 0.21780 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5br7 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.212 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.3.11) |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 36.422 | 36.420 | 3.020 |
High resolution limit [Å] | 2.850 | 8.550 | 2.850 |
Rmerge | 0.124 | 0.052 | 0.945 |
Rmeas | 0.127 | 0.054 | 0.961 |
Rpim | 0.024 | 0.011 | 0.177 |
Number of reflections | 27527 | 641 | 2375 |
<I/σ(I)> | 20.8 | ||
Completeness [%] | 100.0 | 98.9 | 100 |
Redundancy | 28.5 | 23.1 | 29.2 |
CC(1/2) | 0.998 | 0.998 | 0.941 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | 100 mM Tris, 28% PEG400, 20% isopropanol |