6D6K
Structure of polyribonucleotide nucleotidyltransferase from Acinetobacter baumannii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-03-15 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97872 |
Spacegroup name | P 63 |
Unit cell lengths | 93.690, 93.690, 266.610 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 44.435 - 2.500 |
R-factor | 0.1592 |
Rwork | 0.157 |
R-free | 0.20720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3gme per morda |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MoRDa |
Refinement software | PHENIX ((dev_3092)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.435 | 44.435 | 2.570 |
High resolution limit [Å] | 2.500 | 11.180 | 2.500 |
Rmerge | 0.071 | 0.023 | 0.505 |
Rmeas | 0.078 | 0.025 | 0.551 |
Number of reflections | 45569 | 510 | 3355 |
<I/σ(I)> | 20.53 | 50.27 | 4.29 |
Completeness [%] | 99.8 | 92.9 | 99.8 |
Redundancy | 6.445 | 6.059 | 6.486 |
CC(1/2) | 0.999 | 1.000 | 0.917 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 285 | Microlytic MCSG1 screen, C9: 32% PEG 4000, 800mM LiCl, 100mM Tris Base / HCl: AcbaC.17868.b.B1.PS38264 at 20.7mg/ml: cryo: direct: tray 292329c9: puck vqb8-4 |