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6D54

Low Temperature joint X-ray/neutron structure of DNA oligonucleotide d(GTGGCCAC)2 with 2'-SeCH3 modification on Cyt5

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2017-12-12
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.54
Spacegroup nameP 43 21 2
Unit cell lengths41.884, 41.884, 24.307
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution21.300 - 1.900
Rwork0.234
R-free0.26000
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle0.900
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarenCNS (1.0.0)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]40.0002.0001.710
High resolution limit [Å]1.6501.9001.650
Rmerge0.0560.2260.149
Number of reflections2866
<I/σ(I)>16.65.316.6
Completeness [%]100.066100
Redundancy10.43.410.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.63030.1 M magnesium acetate, 30% MPD, 0.1 M MES
1VAPOR DIFFUSION, SITTING DROP5.63030.1 M magnesium acetate, 30% MPD, 0.1 M MES

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